ד"ר יובל דורפן

הפקולטה להנדסת חשמל ואלקטרוניקה
מרצה בכיר / חוקר
ראש המסלול לביו-קונברג'נס

Dr. Dorfan Yuval
Faculty of Electrical and Electronics Engineering
Senior lecturer
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Education

  • 2017
    -
    2020
    MIT
    Postdoc synthetic biology
  • 2013
    -
    2017
    Bar Ilan University
    PhD engineering
  • 2005
    -
    2007
    Reichmann University
    MBA
  • 1998
    -
    2001
    Technion
    M.Sc. electrical engineering
  • 1994
    -
    1998
    Ben Gurion University
    B.Sc. electrical and computer engineering

Research Fields

  • Synthetic microbiology
    • Sustainability applications
    • Food-tech
    • Plastic recycling
    • Novel chassis growth & engineering
  • Bio-convergence
    • Bio-corrosion
    • Anti-mold probiotics for painting
  • Bio-automation
    • Signal processing
    • Image processing
    • Novel automation including cheap HW
  • Acoustic signal processing
    • Distributed localization & tracking
    • AI & acoustic DSP for detection of UAV
    • Acoustic source separation using ML

Teaching Areas

  • Signals & syetems
  • Bio-convergence
  • Synthetic biology
  • Friendly bacteria and sustainability
  • Fourth year projects
  • Grad students thesis: M.Sc., Ph.D. & Postdoc

Selected Publications

For all Publications Google Scholar
  • Yuval Dorfan, Avichay Nahami, Yael Morris, Benny Shohat, Ilana Kolodkin-Gal, (2024), The Utilization of Bacillus subtilis to Design Environmentally Friendly Living Paints with Anti-Mold Properties, Microorganisms.
  • Shai Zilberzwige-Tal, Pedro Fontanarrosa, Darya Bychenko, Yuval Dorfan, Ehud Gazit, Chris J Myers, (2023), Investigating and modeling the factors that affect genetic circuit performance, ACS Synthetic Biology.
  • Naor Dalal, Yossi Oren, Yuval Dorfan, Jonathan Giron, Rami Puzis, (2023), The Attack Surface of Wet Lab Automation, Book chapter.
  • Yuval Dorfan, Yael Morris, Benny Shohat, Ilana Kolodkin-Gal, (2023), Sustainable construction: Toward growing biocement with synthetic biology, Research Directions: Biotechnology Design.
  • Aqib Hasnain, Amin Espah Borujeni, Yongjin Park, Diveena Becker, Paul Maschhoff, Joshua Urrutia, Linus Rydell, Shara Balakrishnan, Yuval Dorfan, Christopher A Voigt, Enoch Yeung, (2023), Disentangling gene expression burden identifies generalizable phenotypes induced by synthetic gene networks, bioRxiv.
  • Yuval Dorfan, Aviv Zeevi, Gita Reinitz, Magi Mualem, Yosi Shacham‐Diamand, (2023), Israel and the global synthetic biology ecosystem, Engineering Biology.
  • Mohammed Eslami, Amin Espah Borujeni, Hamed Eramian, Mark Weston, George Zheng, Joshua Urrutia, Carolyn Corbet, Diveena Becker, Paul Maschhoff, Katie Clowers, Alexander Cristofaro, Hamid Doost Hosseini, D Benjamin Gordon, Yuval Dorfan, Jedediah Singer, Matthew Vaughn, Niall Gaffney, John Fonner, Joe Stubbs, Christopher A Voigt, Enoch Yeung, (2022), Prediction of whole-cell transcriptional response with machine learning, Bioinformatics.
  • Yonatan Chemla, Yuval Dorfan, Adi Yannai, Dechuan Meng, Paul Cao, Sarah Glaven, D Benjamin Gordon, Johann Elbaz, Christopher A Voigt, (2022), Parallel engineering of environmental bacteria and performance over years under jungle-simulated conditions, PLoS One.
  • Yuval Dorfan, Boaz Schwartz, Sharon Gannot, (2021), Forward-backward recursive expectation-maximization for concurrent speaker tracking, EURASIP Journal on Audio, Speech, and Music Processing.
  • Yuval Dorfan, Ofer Schwartz, Sharon Gannot, (2020), Joint speaker localization and array calibration using expectation-maximization, EURASIP Journal on Audio, Speech, and Music Processing.
  • Pedro Fontanarrosa, Hamid Doosthosseini, Amin Espah Borujeni, Yuval Dorfan, Christopher A Voigt, Chris Myers, (2020), Genetic circuit dynamics: hazard and glitch analysis, ACS synthetic biology.
  • Yuval Dorfan, Axel Plinge, Gershon Hazan, Sharon Gannot, (2018), Distributed Expectation-Maximization Algorithm for Speaker Localization in Reverberant Environments, IEEE/ACM Transactions on Audio, Speech and Language Processing (TASLP).
  • Yuval Dorfan, Jacob Rovinsky, (2018), MISSILE VEHICLE COMMUNICATION UNIT, US patent office.
  • Yuval Dorfan, Sharon Gannot, (2015), Tree-based recursive expectation-maximization algorithm for localization of acoustic sources, IEEE/ACM Transactions on Audio, Speech, and Language Processing.
  • Tamir Tuller, Asaf Carmi, Kalin Vestsigian, Sivan Navon, Yuval Dorfan, John Zaborske, Tao Pan, Orna Dahan, Itay Furman, Yitzhak Pilpel, (2010), An evolutionarily conserved mechanism for controlling the efficiency of protein translation, Cell.
  • Erez Sali, Tomer Yanir, Mark Wagner, Noam Dotan, Yuval Dorfan, Ran Zaslavsky, (2010), Method and apparatus for detecting defects in wafers, US patent office.
  • Yuval Dorfan, Arie Feuer, Boaz Porat, (2004), Modeling and Identification of LPTV Systems by Wavelets, Signal Processing.

Experiences

  • 1995-2017: Senior manager in various hi-tech and bio-tech companies.
  • 2017-2020: Research scientist, MIT and the Broad Institute: Leading synthetic biology projects.
  • 2021 – 2023: Co-Founder of Alagene, 1st Israeli bio-foundry supported by IIA, Hylabs, Reichman University and Michael Eisenberg as a national facility for synthetic biology.
  • 2023-Now: Freelancer bio-tech & hi-tech companies

Grants & Awards

  • 2018 - Three years grant from Israeli DoD for engineering soil and water bacteria for field applications, budget: 1M$.
  • 2021 - Research grant from defense office for air contamination detection, budget: 400K nis
  • 2021 - IIA grant for synthetic biology national facility, budget: 40M nis
  • 2024 - ISF for 5 years with Dr. Ilana Kolodkin-Gal, Reichman University
  • 2025 - Israeli Science Office grant for 2 years with Dr. Moshe Shemesh, Volcani Institute

International Projects

  • 2017-2021: DARPA project for genetic circuits
  • 2024 - ISF for 5 years with international collaboration: Prof. Douglas Densmore from BU, USA

Exhibitions & Events